BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032E05LP1|AL429582
(452 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig171 251 7e-67
>3x_Contig171
Length = 902
Score = 251 bits (121), Expect = 7e-67
Identities = 132/137 (96%)
Strand = Plus / Plus
Query: 316 tcgtggaaaaccagcyatttgcgaaccagatttgtctttcaccgcttaacacaactcatc 375
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tcgtggtaaaccagctatttgcgaaccagatttgtctttcaccgcttaacacaactcatc 218
Query: 376 agatgatattgcmacatcaacctgttcgaccgtttccgtctggtcatattaagascgtcc 435
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 219 agatgatattgcaacatcaacctgttcgaccgtttccgtctggtcatattaagatcgtcc 278
Query: 436 gccttcgggtcaattaa 452
|| ||||||||||||||
Sbjct: 279 gctttcgggtcaattaa 295
Score = 100 bits (48), Expect = 3e-21
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 185 aaacatttcgagattaaatacctttgataaaakaacaatbatbccccaaawaatat 240
|||||||||||||||||||||||||||||||| |||||| || ||||||| |||||
Sbjct: 28 aaacatttcgagattaaatacctttgataaaataacaattattccccaaataatat 83
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.718 1.36
Gapped
Lambda K H
1.44 0.718 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1584
Number of Sequences: 1807
Number of extensions: 1584
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 452
length of database: 10,358,551
effective HSP length: 15
effective length of query: 437
effective length of database: 10,331,446
effective search space: 4514841902
effective search space used: 4514841902
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.1 bits)
S1: 11 (23.3 bits)
S2: 48 (100.2 bits)